Table 2.

Significant SNPs in conditional meta-analysis in individual cohorts

CHRGABC + TSS (N = 3238)GABC (n = 934)TSS (n = 2304)
SNPMAFβJ (%)SE (%)PJMAFβ (%)SE (%)PMAFβ (%)SE (%)P
9q34.2rs286736470.387.10.51.2E-570.366.91.08.1E-130.396.60.59.3E-42
rs37398930.02−22.31.81.2E-300.01−15.64.71.7E-30.02−23.31.92.0E-28
21q22.3rs40759700.452.40.46.8E-90.485.01.01.4E-70.441.40.54.6E-03
9q34.2rs31247620.163.50.68.9E-90.15−1.21.4.380.170.90.7.18
  • β, percentage change per allele; CHR, chromosome; J, joint effects of independently associated SNPs; N or n, number of individuals in the indicated study cohort(s); SE, standard error.